 |
Tentative Conference Program
| Sunday, November 4, 2007 |
| 18:30 - 20:00 |
Opening Reception |
|
Light refreshments including New Zealand wine and finger food
|
| |
| Monday, November 5, 2007 |
| 8:30 - 9:40 |
Invited Presentation
|
|
|
| 10:10 - 12:00 |
Resource allocation
|
|
- Mechanistic modelling of carbon allocation among sinks: A generalised Münch model for branched architectures
André Lacointe, Peter Minchin
- A dynamic 3D model of rape (Brassica napus L.) computing yield components under variable nitrogen fertilisation regimes
Christian Groer, Ole Kniemeyer, Reinhard Hemmerling, Winfried Kurth, Heiko Becker, Gerhard Buck-Sorlin
- Calibration of fruit cyclic patterns in cucumber plants as a function of source-sink ratio with the GreenLab model
Amélie Mathieu, BaoGui Zhang, Ep Heuvelink, ShuJun Liu, Paul-Henry Cournède, Philippe de Reffye
- Self-organized resource allocation and growth partitioning at the whole plant level: a modeling study
Zongjian Yang, David J. Midmore
- Evaluation and calibration of the carbohydrate assimilation, partitioning, and transport processes in the L-PEACH model
Romeo Favreau, Gerardo Lopez, Colin Smith, Theodore DeJong
|
| 13:30 - 14:40 |
Invited Presentation
|
|
|
| 15:10 - 17:00 |
Signals and development
|
|
- Hypothesis-driven computational modelling of branching control in pea
Elizabeth A. Dun, Jim Hanan, Christine A. Beveridge
- Integrative hybrid modelling of plant shoot branching
Philip Garnett, Susan Stepney, Ottoline Leyser
- Apical dominance models can generate basipetal patterns of bud activation
Przemyslaw Prusinkiewicz, Richard S. Smith, Ottoline Leyser
- Modeling auxin fluxes and Arabidopsis root ramification at different scales
Mikaël Lucas, Laurent Laplaze, Christian Jay-Allemand, Christophe Godin
- Virtual soybean - a computational model for studying autoregulation of nodulation
Liqi Han, Peter M. Gresshoff, Jim Hanan
|
| Tuesday, November 6, 2007 |
| 8:30 - 10:00 |
Photosynthesis |
|
- Towards universality and modularity: a generic photosynthesis and transpiration module for functional structural plant models
Johannes Müller, Henning Braune, Peter Wernecke, Wulf Diepenbrock
- Dissecting maize matter production variability using a structural model - An original approach to drive maize breeding for cold tolerance
Gaetan Louarn, Karine Chenu, Christian Fournier, Bruno Andrieu, Catherine Giauffret
- Models of photosynthesis need to and can be upgraded to include the effects of drought, phenological changes, sink activity and carbohydrate accumulation on the light exposure/photosynthetic capacity relationship
Gaëlle Damour, Laurent Urban
- Extending a functional-structural plant model of spring wheat with sub-models for photosynthesis and carbon distribution
Jochem B. Evers, Jan Vos, Pascual Romero, Xinyou Yin, Peter E.L. van der Putten, MengZhen Kang, Paul C. Struik
|
| 10:30 - 12:15 |
Nitrogen in plants |
|
|
| |
Plant measurement techniques |
|
- A preliminary field evaluation of an automated vision-based plant geometry measurement system
Cheryl McCarthy, Nigel Hancock, Steven Raine
- Structural tree modelling of aboveground and belowground poplar tree using direct and indirect measurements: Terrestrial laser scanning, WGROGRA, AMAPmod and JRC-3D Reconstructor®.
Maurizio Teobaldelli, Terenzio Zenone, David Puig, Marco Matteucci, Günther Seufert, Vitor Sequeira
- Use of Ground-Penetrating Radar (GPR) and Electrical Resistivity Tomography (ERT) to study tree roots volume in pine forest and poplar plantation
Gianfranco Morelli, Terenzio Zenone, Maurizio Teobaldelli, Federico Fischanger, Marco Matteucci, Günther Seufert
|
| 13:30 - 15:00 |
Modeling software |
|
- Functional-structural modelling using the generic tool PIAF-1: a simulation example on young walnut
André Lacointe, Nicolas Donès
- The rule-based language XL and the modelling environment GroIMP, illustrated with simulated tree competition.
Ole Kniemeyer, Reinhard Hemmerling, Gerhard Buck-Sorlin, Winfried Kurth
- Manipulating virtual plants
Przemyslaw Prusinkiewicz, Brendan Lane, Radomir Mech
- The architecture of OpenAlea: A visual programming and component based software for plant modeling
Christophe Pradal, Samuel Dufour-Kowalski, Frédéric Boudon, Nicolas Donès
|
| 15:30 - 17:00 |
Posters and software demos |
|
See accepted posters here.
|
| |
| Wednesday, November 7, 2007 |
| 8:30 - 10:00 |
Plants, pathogens, and sprays |
|
- Modelling plant architecture to determine biocontrol strategies
Dave Skirvin, Irene Roberts
- Coupling 3D virtual plant and foliar epidemic models: a new modelling approach to investigate plant-pathogen interactions linked to architecture
Corinne Robert, Christian Fournier, Bruno Andrieu, Bertrand Ney
- Spray deposition on plant surfaces: a modeling approach
Gary Dorr, Jim Hanan, Steve Adkins, Andrew Hewitt, Barry Noller
- A software for the simulation of rainfall distribution on 3D plant architecture: PyDROP
Samuel Dufour-Kowalski, Céline Bassette, François Bussière
|
| 10:30 - 12:00 |
Biophysics and biomechanics |
|
- A 3 dimensional physical model to predict temperature dynamics within fruits in response to environment changes
Marc Saudreau, Hervé Sinoquet, André Marquier, Boris Adam, Olivier Santin, Michaël Chelle
- Smulation of apple tree development using mixed statistical and biomechanical models
Colin Smith, Christophe Godin, Yann Guédon, Przemyslaw Prusinkiewicz, Evelyne Costes
- The role of structural and life-history tradeoffs in plant architecture: a model study of Protea lepidocarpodendron (Proteaceae)
Lawrence D. Harder, Brendan Lane, Przemyslaw Prusinkiewicz
- Numerical analysis of the influence of the aerial structure on tree dynamics
Damien Sellier, Thierry Fourcaud
|
| Thursday, November 8, 2007 |
| 8:30 - 10:00 |
Crop plants |
|
- A simple model simulating the construction of blade and sheath length in maize
Christian Fournier, Bruno Andrieu
- An L-system based model of a ryegrass heterogeneous population
Alban Verdenal, Didier Combes, Abraham Escobar-Gutiérrez
- Architectural analysis and modeling of maize growth and development under water stress
Youhong Song, Colin Birch, Jim Hanan
- Canopy architecture quantification and spatial direct light interception modeling of hybrid rice
Bangyou Zheng, Lijuan Shi, Yuntao Ma, Qiyun Deng, Baoguo Li, Yan Guo
|
| 10:30 - 12:00 |
Tree models |
|
- Identifying and characterizing the ontogenetic component in tree development
Yann Guédon, Yves Caraglio, Patrick Heuret, Emilie Lebarbier, Céline Meredieu
- Linking carbon economy and architectural development of peach trees by integrating markovian models into L-PEACH
Evelyne Costes, Colin Smith, Romeo Favreau, Yann Guédon, Theodore DeJong
- Parameter identification of a functional-structural tree growth model and application to beech trees (Fagus sylvatica, Fagaceae)
Véronique Letort, Paul-Henry Cournède, Amélie Mathieu, Philippe de Reffye, Thiéry Constant
- Does the response of leaf stomata to light and vapour pressure follow from limitations in long distance transport?
Eero Nikinmaa, Teemu Hölttä, Martti Perämäki, Risto Sievänen, Timo Vesala
|
| 13:30 - 15:15 |
Leaves to canopies |
|
- Modeling leaf phototropism in a cucumber canopy
Katrin Kahlen, Dirk Wiechers, Hartmut Stützel
- 3D Modelling of growth and ornamental quality of chrysanthemum at different plant densities
Pieter de Visser, Gerie van der Heijden, Ep Heuvelink
- Long-term crown expansion of Quercus crispula in Hokkaido, northern Japan: observation and modeling
Kiyoshi Umeki, Kentaro Tada, En-Mi Lin, Tsuyoshi Honjo
- Extension of a single tree functional-structural model to stand level
Risto Sievänen, Jari Perttunen, Eero Nikinmaa
- Leaves to landscapes: using high performance computing to assess patch-scale forest response to regional temperature and trace gas gradients
George E. Host, Harlan W. Stech, Kathryn E. Lenz, Kyle Roskoski, Richard Mather, Michael Donahue
|
| 15:30 - 17:00 |
Posters and software demos |
|
See accepted posters here.
|
| |
| Friday, November 9, 2007 |
| 8:30 - 10:00 |
Mathematical methods |
|
|
| 10:30 - 12:00 |
Patterns and tissue |
|
- Creating complex patterns from simple developmental rules
Scott Hotton, Jacques Dumais
- Using mechanics in the modelling of meristem morphogenesis
Szymon Stoma, Jérôme Chopard, Christophe Godin, Jan Traas
- Growth dynamics of the shoot apical meristem: global, cellular and sub-cellular approach
Anne-Lise Routier-Kierzkowska, Dorota Kwiatkowska
- Trichome patterning on growing tissue
Pierre Barbier de Reuille, Adam Runions, Richard Smith, Enrico Coen, Przemyslaw Prusinkiewicz
|
| 13:30 - 15:15 |
Light environment |
|
- Simulating the red:far-red ratio of individual plant organs, a key issue for phytochrome-driven processes.
Michaël Chelle, Jochem B. Evers, Christian Fournier, Didier Combes, Jan Vos, Bruno Andrieu
- Quasi-Monte Carlo simulation of the light environment of virtual plants
Mikolaj Cieslak, Christiane Lemieux, Przemyslaw Prusinkiewicz
- Modeling light phylloclimate within growth chambers
Michaël Chelle, Christophe Renaud, Samuel Delepoulle, Didier Combes
- Modeling of light transmission under heterogeneous forest canopy: model description and validation
David Da Silva, Phillippe Balandier, Frédéric Boudon, André Marquier, Christophe Pradal, Christophe Godin, Hervé Sinoquet
- Assessing the light environment for Scots pine in the functional-structural tree model LIGNUM
Jari Perttunen, Risto Sievänen, Eero Nikinmaa
|
| 15:45 - 17:00 |
Closing session |
| |
| |
|
Accepted posters |
| |
- 3D virtual plants to phenotype differences among genotypes: Taking into account plant-environment interactions to better understand genetic variability in leaf development response to light
Karine Chenu, Jérémie Lecoeur
- The application of a functional-structural plant model to validate a mechanistic model of ozone-induced photosynthetic rate reduction in Populus tremuloides
Michael A. Donahue, George E. Host, Kathryn E. Lenz, Kyle Roskoski, Harlan W. Stech
- An architectural modelling study of chickpea-sowthistle interactions
S-Zahra-Hosseini Cici, Steve Adkins, Brian Sindel, Jim Hanan
- Asynchronous cell division model for morphogenesis of plant leaves
Toshiya Kazama, Satoshi Murata
- Automated procedures for estimating LAI of Australian woodland ecosystems using digital imagery, Matlab programming and LAI / MODIS LAI relationship
Sigfredo Fuentes, Anthony R. Palmer, Daniel Taylor, Chris Hunt, Derek Eamus
- Automatic instantiation of a structural leaf model from 3D scanner data: application to light interception computation
Jean-Christophe Chambelland, Boris Adam, Nicolas Donès, Philippe Balandier, André Marquier, Mathieu Dassot, Gabriela Sonohat, Marc Saudreau, Hervé Sinoquet
- Contribution of leaf orientation and leaf physiology to the maximization of plant carbon gain
Juan M. Posada, Risto Sievanen, Jari Perttunen, Christian Messier, Eero Nikinmaa
- Describing hierarchical canopy structure and within-canopy multiple scattering with spectral invariants for remote sensing purposes
Sampo Smolander
- A dynamic model system to couple the organ length and mass dynamics specified for spring barley (Hordeum vulgare L.)
Peter Wernecke, Tino Dornbusch, Johannes Müller
- Dynamical models for plant pattern formation
Scott Hotton, Jacques Dumais
- The effect of branching on cotton plant growth and development
Dong Li, Yan Guo, Zhigang Zhan
- Effect of the plants azimuth on light phylloclimate within a virtual maize canopy
Michaël Chelle, Paul Toulouse
- Enhancing the simulation of a hydraulic tree-soil system by an interface between the hydraulic models HYDRA for Quercus petraea (Matt.) Liebl. and the hydraulic soil model SilVlow
Helge Dzierzon, Michael Schulte, Christoph Blendinger, Branislav Sloboda, Winfried Kurth
- Estimation of the amount of light intercepted by a plant in natural and artificial environments: Contribution of 3D virtual plants in sunflower and Arabidopsis thaliana
Karine Chenu, Hervé Rey, Jean Dauzat, Jérémie Lecoeur
- Evaluating a three-dimensional model of incident radiation in maize canopy
Xiping Wang, Yan Guo, Xiyong Wang, Baoguo Li
- Evaluation of a turbid medium model to simulate light interception by plant canopies at three spatial scales
Didier Combes, Michaël Chelle, Hervé Sinoquet, Abraham Escobar-Gutiérrez, Claude Varlet-Grancher
- Examining the influences of canopy structure on the light distribution and canopy productivity of cucumber using a 3D structural plant model approach
Dirk Wiechers, Katrin Kahlen, Hartmut Stützel
- Experimental and model evidence for complementary resource use in mixed-species rainforest tree plantations
Anna E. Richards, Susanne Schmidt, Jim Hanan
- Exploring morphogenetical gradient variability using hidden Markov tree models in young individuals of the tropical species Symphonia globulifera (Clusiaceae).
Patrick Heuret, Jean-Baptiste Durand, Eric Nicolini, Sabrina Coste, Yves Caraglio
- Fast forest visualization on hierarchical images and visibility
Qingqiong Deng, Xiaopeng Zhang, Xiangdong Lei, Marc Jaeger
- From ALife plant models toward evolutionary FSPM
Stefan Bornhofen, Claude Lattaud
- A functional-structural model of rice (Oryza sativa L.) linking morphogenesis with quantitative trait loci
Lifeng Xu, Ole Kniemeyer, Jun Zhu, Gerhard Buck-Sorlin
- GRAAL-CN: a model of GRowth, Architecture and ALlocation for Carbon and Nitrogen dynamics within whole plants formalized at the organ level
Jean-Louis Drouet, Loïc Pagès
- GREENLAB as a tool to solve source-sink relationships in tomato - Application to the quantification of fruit set dependence on the level of competition for assimilates
Gaetan Louarn, Yang Lili, Dong Qiaoxue, Phillipe de Reffye
- Growth and architecture modeling of yerba-mate cultivated in contrasting light environments using AMAPmod
Miroslava Rakocevic, Adriano Franzoni Otavian, Sílvio Evangelista, Érica Vitória Picarelli, Eduardo Delgado Assad
- Growth unit dimorphism in mango. Consequences for structure-function modelling
Frédéric Normand, Abdoul Kowir Pambo Bello, Pierre-Eric Lauri
- A hybrid method to estimate light phylloclimate within growth chambers
Didier Combes, Boris Adam, Agélique Christophe, Michaël Chelle
- Including the effect of biological processes in the allometric scaling relationships
Pekka Kaitaniemi, Anna Vehanen
- The influence of branching pattern on the performance of tree species
Sandra Mueller, Ernst-Detlef Schulze
- Is Lacunarity a valuable measure of plant canopy structure?
Irene Roberts, Rudolf A. Roemer, Dave Skirvin
- A model for sporophyte development in the filamentous brown alga Ectocarpus siliculosus
Bernard Billoud, Aude Le Bai, Bénédicte Charrier
- Modeling tree crown photosynthesis in elevated atmospheric CO2
David Ellsworth, Marion Liberloo
- Modelling the time course of senescence in winter wheat at the individual leaf and whole plant level
Jonathan Hillier, Jillian Watt, Jessica Bertheloot, Phillip Lewis, Christian Fournier, Bruno Andrieu
- Modelling wheat behaviour under different population densities using the stochastic GreenLab model
MengZhen Kang, Jochem B. Evers, Véronique Letort, Jan Vos, Philippe de Reffye
- On the implementation of the functional-structural tree model LIGNUM
Jari Perttunen, Risto Sievänen, Jouni Hartikainen, Eero Nikinmaa
- OpenAlea: An open-source platform for the integration of heterogeneous FSPM components
Samuel Dufour-Kowalski, Christophe Pradal, Nicolas Donès, Pierre Barbier de Reuille, Frédéric Boudon, Jérôme Chopard, David Da Silva, Jean-Baptiste Durand, Pascal Ferraro, Christian Fournier, Yann Guédon, Aïda Ouangraoua, Colin Smith, Szymon Stoma, Frédéric Théveny, Hervé Sinoquet, Christophe Godin
- Relative contribution of foliage display and leaf functions to branch physiological capacities in two apple cultivars: a functional-structural modeling approach
Catherine Massonnet, Jean-Luc Regnard, Pierre-Eric Lauri, Hervé Sinoquet, Evelyne Costes
- Scaling up to whole-plant and crop levels short-term responses of leaf growth to water deficit
Karine Chenu, Scott C. Chapman, Graeme L. Hammer, Greg McLean, Christian Fournier, François Tardieu
- Segmentation-based approaches for characterising plant architecture and assessing its plasticity at different scales
Jean-Baptiste Durand, Yves Caraglio, Patrick Heuret, Eric Nicolini
- Shedding morphogenetically active radiation on functional structural plant models
Didier Combes, Abraham Escobar-Gutiérrez, Claude Varlet-Grancher
- Simulating perennial ryegrass cutting
Alban Verdenal, Didier Combes, Abraham Escobar-Gutiérrez
- Simulation of fertility behavior of natural populations of rice at two environments using L-system
Lakshmi P. Subedi, Tara N. Subedi
- A statistical model for analyzing jointly growth phases, the influence of environmental factors and inter-individual heterogeneity. Applications to forest trees.
Florence Chaubert, Yves Caraglio, Christian Lavergne, Catherine Trottier, Yann Guédon
- Using the language XL for structural analysis
Ole Kniemeyer, Jan-Anton Dérer, Reinhard Hemmerling, Gerhard Buck-Sorlin, Winfried Kurth
- Variation of leaf blade optical properties with the time cut from plant
Cailian Lao, Jinhe Hu, Yuntao Ma, Baoguo Li, Yan Guo
- Virtual kiwifruit: Modelling annual growth cycle and light distribution
Mikolaj Cieslak, Alla N. Seleznyova, Jim Hanan
- Virtual phyllotaxis and real plant model cases
Beata Zagórska-Marek, Marcin Szpak
- Virtual rose: a new tool to optimize plant architecture in glasshouse rose production systems
Gerhard Buck-Sorlin, Benno S. Burema, Jochem B. Evers, Gerie van der Heijden, Ep Heuvelink, Leo Marcelis, Paul C. Struik, Pieter de Visser, Theo Damen, Jan Vos
- Visualizing reaction of chrysanthemum to temperature and light: model calibration and validation
MengZhen Kang, Ep Heuvelink, Véronique Letort, Paul-Henry Cournède, Susana M.P. Carvalho, Philippe de Reffye
- Woody stem itself senses light environment and phototropically bends by asymmetrical xylem formation
Jun Matsuzaki, Masaya Masumori, Takeshi Tange
|
|
